CDS
| Accession Number | TCMCG057C27409 |
| gbkey | CDS |
| Protein Id | XP_018486912.1 |
| Location | join(33840707..33840797,33840873..33840949,33841034..33841111,33841213..33841341,33841440..33841490,33841576..33841704,33841789..33841911,33841993..33842070,33842178..33842270,33842356..33842481,33842679..33842762,33842848..33842946,33843037..33843225,33843341..33843416,33843535..33843638,33843726..33843985,33844080..33844166,33844262..33844492,33844603..33844681,33844773..33844836,33844928..33845043) |
| Gene | LOC108857423 |
| GeneID | 108857423 |
| Organism | Raphanus sativus |
Protein
| Length | 787aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018631410.1 |
| Definition | PREDICTED: pre-rRNA-processing protein TSR1 homolog [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | pre-rRNA-processing protein TSR1 homolog |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14799
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGGCGCTCTCGAGTTCAAGTCAATAAGGCTCACAAGACTCGTTTCTCCTCTAAGTCTTCTCGCAATCTTCACAAAACCTCCCTCCAAGATGGAGGCCGGATTGGTAAACCGGAGGGTAACCATGTTAAAGGAGCTAGAGCTGCTCGTCTCCAGCGTGGCAAAATGCTTAGAGAGCAGAAAAGAGCAGCGGTATTGAAGGAGAAGAGGGCTTCAGGAGGCTTATCCAGCGCTCCTCGTGTTATCGTCTTGTTTCCTCTCTCTGCTTCTGTGGATTTGAACTCACTTGGTGAAGATGTTTTAAAGCTGTTATCTACTGATGGTGGTGATGATTCTTCAACAGTTGCATCTTCTGAGTATAAGCTAAGAGCAACAGTGTTGAAGGCGCCTCATGGGGATCTTCTGACATGCATGGAAATGGCCAAGGTTGCTGATCTGATCGCTTTTGTTGCATCTGCAAACGAGGATATCTCTAGCTTAATAGATTCATTCGGAAGTCAGTGTCTTTCTGTGCTTAGATCAATTGGTCTACCAAGTACCGCTGTGTTGATACGTGACTTACCAAGCGAGTTAAAAAAGAAAAATGAGCTGAAAAAGATGTGTATCTCTCAGCTTACTTCTGAATTTCCCGAGGATTGTAAGTTCTATCCAGCAGATACTAGAGATGAGTTGCATAAGTTCATGTGGTTATTCAAGGCACAAAGGCTTTCTGTACCTCATTGGCGAAGTCAAAGACCATATGTTGTGGCTCACAAGGTTGGGATGGTGGTGGATGATAAAAGCCCAGGAGAGTGCACTCTACTTCTCTCCGGTTACTTGCGTGCTCGTAAGCTATCTGTAAATCAGCTGGTCCATGTTACTGGCGTTGGTGATTTTCAGCTCTCAAAAGTCGAAGTCCTGAAGGACCCTTTTCCCTTAAATGAAAGGAAAAAACAGAATTCCATGGAATTGGATGATGATTCACATGATGAAGAGGTATTGAGGTCTCTGGTTCCTGATCCAATGAGCCAAGAGCCTTTAGTAGTTGAAAACACTCCAGATCCGTTAGCAGGAGAACAGACATGGCCAACTGAGTCAGAGATGGCTGAGGCTGACAGAAATCAGGAACAGAGAAAGTCAAAGAAGAGGATTTTGCCACGAGGGACTTCAGAGTATCAGGCTGCTTGGATTGTGGATGAGAAGATAGATGAAGAGGACTCTGATAATGGTGATTCCGATGATGATGGTATGGTGTTGGATAGAGGAGAGGATCACTATTCCAATCAAGACCAAGATTTTGAGGATGATAAAGAAACACTGTACGTGCAGGATATGGATAATGAAACTCATAATGACTCCGAGATGATGGATGATGAAAACTTGACAAGAGAACAATATGAGGATCAAATCAAGAAAATCAAAGAGGCACATGCTGAAGATGAAGAATTTCCAGATGAGGTGGAGACTCCCATTGACCAGCCTGCAAGAAAACGTTTTGCAAAGTACAGAGGTCTCAAATCCTTCAGAACCTCCTCGTGGGATCCAAATGAGTCTCTACCTCAGGATTATGCCAGAATCTTTGCTTTTGATAACGTCGTTAGGACTCAAAAGCTTGTGCTCAAGCAAGCCCAGAAGATGGAAGAAGAAAGCAGAGAAGATTGTGTACCAACTGGGTCTTATGTACGGCTGCATATTAAGGAAGTGCCTATTGTTGCTGCCTCTAAACTATCCTCCATCGTAAGCACGAAACCCGTTATAGCATTTGGGCTTTTACAGCATGAATCCAAGATGTCGGTTCTGAACTTTAGCTTAAAGAAGTATGATGGTTACGAAGATCCTATTAAAACGAAAGAAGAGCTGATGTTCCATGTTGGTTTCCGTCAGTTCGTTGCAAGGCCAGTATTTTCAACAGACAATTTCAGGTCAGACAAACACAAGATGGAGAGGTTTCTGCATCCAGGTCGTTTCTCGTTGGCTTCAGTATACGGTCCAATATCTTTCCCATCCCTTCCTGCGGTAGTTCTGAAGATTTCTGAAGGGTCCGATGCTCCTGCCGTTGCTGCCCTTGGTTCCTTGAAAAGCATTGAACCCAACAAAATAATCTTGAAGAAGATAATATTGACTGGGTATCCTCAGAGAGTATCAAAAATGAAAGCATCAGTAAGATATATGTTCCATAACCCGGAAGACGTGAGATGGTTTAAGCCTGTAGAAGTGTGGACAAAATGTGGGCGTCGTGGTCGCGTGAAGGAGCCAGTGGGCACACATGGTGCAATGAAATGCATATTCAATGGAGTGGTGCAGCAACATGACGTTGTGTGCATGAACTTATACAAGCGTGCTTATCCCAAATGGCCTGAGCGTATGTACCCCCAGCTTCTGTAA |
| Protein: MGRSRVQVNKAHKTRFSSKSSRNLHKTSLQDGGRIGKPEGNHVKGARAARLQRGKMLREQKRAAVLKEKRASGGLSSAPRVIVLFPLSASVDLNSLGEDVLKLLSTDGGDDSSTVASSEYKLRATVLKAPHGDLLTCMEMAKVADLIAFVASANEDISSLIDSFGSQCLSVLRSIGLPSTAVLIRDLPSELKKKNELKKMCISQLTSEFPEDCKFYPADTRDELHKFMWLFKAQRLSVPHWRSQRPYVVAHKVGMVVDDKSPGECTLLLSGYLRARKLSVNQLVHVTGVGDFQLSKVEVLKDPFPLNERKKQNSMELDDDSHDEEVLRSLVPDPMSQEPLVVENTPDPLAGEQTWPTESEMAEADRNQEQRKSKKRILPRGTSEYQAAWIVDEKIDEEDSDNGDSDDDGMVLDRGEDHYSNQDQDFEDDKETLYVQDMDNETHNDSEMMDDENLTREQYEDQIKKIKEAHAEDEEFPDEVETPIDQPARKRFAKYRGLKSFRTSSWDPNESLPQDYARIFAFDNVVRTQKLVLKQAQKMEEESREDCVPTGSYVRLHIKEVPIVAASKLSSIVSTKPVIAFGLLQHESKMSVLNFSLKKYDGYEDPIKTKEELMFHVGFRQFVARPVFSTDNFRSDKHKMERFLHPGRFSLASVYGPISFPSLPAVVLKISEGSDAPAVAALGSLKSIEPNKIILKKIILTGYPQRVSKMKASVRYMFHNPEDVRWFKPVEVWTKCGRRGRVKEPVGTHGAMKCIFNGVVQQHDVVCMNLYKRAYPKWPERMYPQLL |